1H4I	Dehydrogenase	date	May 11, 2001
title	Methylobacterium Extorquens Methanol Dehydrogenase
authors	M.Ghosh, C.Anthony, K.Harlos, M.G.Goodwin, C.Blake
compound		source
Molecule: Methanol Dehydrogenase Subunit 1 Chain: A, C Synonym: Mdh Large, Alpha Subunit, Medh		Organism_scientific: Methylobacterium Extorquens Organism_taxid: 408
Molecule: Methanol Dehydrogenase Subunit 2 Chain: B, D Synonym: Mdh Small, Beta Subunit, Medh Ec: 1.1.99.8 Other_details: Pyrrolo-Quinoline Quinone Prosthetic Group With Active Site Calcium Ions		Organism_scientific: Methylobacterium Extorquens Organism_taxid: 408
symmetry	Space Group: P 1	R_factor 0.1985 R_Free 0.2293
crystal cell	length a length b length c angle alpha angle beta angle gamma 61.160 72.190 86.170 86.21 76.09 70.44
method	X-Ray Diffraction	resolution	1.94 Å
ligand	CA, PQQ	enzyme	Oxidoreductase E.C.1.1.99.8 BRENDA
related structures	by homologous chain: 1G72, 4AAH
Gene Ontology	Chain Function Process Component A, C D, B
Primary reference	The refined structure of the quinoprotein methanol dehydrogenase from Methylobacterium extorquens at 1.94 A., Ghosh M, Anthony C, Harlos K, Goodwin MG, Blake C, Structure 1995 Feb 15;3(2):177-87. PMID:7735834

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (217 Kb) [Save to disk] Biological Unit Coordinates (1h4i.pdb1.gz) 212 Kb LPC: Ligand-Protein Contacts for 1H4I CSU: Contacts of Structural Units for 1H4I Likely Quarternary Molecular Structure file(s) for 1H4I Retrieve 1H4I in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1H4I from S2C, [Save to disk]

View 1H4I in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1H4I

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1H4I, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1h4ia_, region A [Jmol] [rasmolscript] [script source]     - Domain d1h4ib_, region B [Jmol] [rasmolscript] [script source]     - Domain d1h4ic_, region C [Jmol] [rasmolscript] [script source]     - Domain d1h4id_, region D [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1h4i_B] [1h4i_C] [1h4i] [1h4i_D] [1h4i_A] SWISS-PROT database: [P16027] [P14775] Domain organization of [DHM1_METEA] [DHM2_METEA] by SWISSPFAM Domain found in 1H4I: [PQQ ] by SMART

Other resources with information on 1H4I

Community annotation for 1H4I at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---