1HCG Coagulation Factor date May 05, 1993
title Structure Of Human Des(1-45) Factor Xa At 2.2 Angstroms Resolution
authors A.Tulinsky, K.Padmanabhan
compound source
Molecule: Blood Coagulation Factor Xa
Chain: A
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Blood Coagulation Factor Xa
Chain: B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 41 21 2
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
93.660 93.660 119.300 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
related structures by homologous chain: 1LPK, 1NFX
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of human des(1-45) factor Xa at 2.2 A resolution., Padmanabhan K, Padmanabhan KP, Tulinsky A, Park CH, Bode W, Huber R, Blankenship DT, Cardin AD, Kisiel W, J Mol Biol 1993 Aug 5;232(3):947-66. PMID:8355279
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (1hcg.pdb1.gz) 51 Kb
  • CSU: Contacts of Structural Units for 1HCG
  • Likely Quarternary Molecular Structure file(s) for 1HCG
  • Retrieve 1HCG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HCG from S2C, [Save to disk]
    • View 1HCG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1HCG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HCG, from MSDmotif at EBI
  • Genome occurence of 1HCG's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hcga_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1hcgb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hcg_A] [1hcg_B] [1hcg]
  • SWISS-PROT database: [P00742]
  • Domain organization of [FA10_HUMAN] by SWISSPFAM
  • Domains found in 1HCG: [EGF] [Tryp_SPc ] by SMART
    • Other resources with information on 1HCG
  • Community annotation for 1HCG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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