1HF4	Hydrolase	date	Nov 29, 2000
title	Structural Effects Of Monovalent Anions On Polymorphic Lysoz Crystals
authors	M.C.Vaney, I.Broutin, M.Ries-Kautt, A.Ducruix
compound		source
Molecule: Lysozyme Chain: A, B Synonym: Hen (Gallus Gallus) Egg-White Lysozyme, Mucopeptid Acetylmuramyl Hydrolase; Ec: 3.2.1.17		Organism_scientific: Gallus Gallus Organism_common: Chicken Organism_taxid: 9031 Tissue: Egg White Cellular_location: Cytoplasm (White)
symmetry	Space Group: P 1 21 1	R_factor 0.215 R_Free 0.256
crystal cell	length a length b length c angle alpha angle beta angle gamma 27.940 62.730 60.250 90.00 90.76 90.00
method	X-Ray Diffraction	resolution	1.45 Å
ligand	NA, NO3	enzyme	Hydrolase E.C.3.2.1.17 BRENDA
related structures	by homologous chain: 194L, 1LZB
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural effects of monovalent anions on polymorphic lysozyme crystals., Vaney MC, Broutin I, Retailleau P, Douangamath A, Lafont S, Hamiaux C, Prange T, Ducruix A, Ries-Kautt M, Acta Crystallogr D Biol Crystallogr 2001 Jul;57(Pt 7):929-40. PMID:11418760

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk] Biological Unit Coordinates (1hf4.pdb1.gz) 25 Kb Biological Unit Coordinates (1hf4.pdb2.gz) 26 Kb LPC: Ligand-Protein Contacts for 1HF4 CSU: Contacts of Structural Units for 1HF4 Likely Quarternary Molecular Structure file(s) for 1HF4 Structure Factors (235 Kb) Retrieve 1HF4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1HF4 from S2C, [Save to disk] Re-refined 1hf4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1HF4 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1HF4

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1HF4 1HF4A 1HF4B from the CEP Server. Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1HF4, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1hf4a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1hf4b_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1hf4] [1hf4_A] [1hf4_B] SWISS-PROT database: [P00698] Domain organization of [LYSC_CHICK] by SWISSPFAM Domain found in 1HF4: [LYZ1 ] by SMART

Other resources with information on 1HF4

Community annotation for 1HF4 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 1HF4 from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

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