1HVR Hydrolase Hydrolase Inhibitor date Feb 14, 1994
title Rational Design Of Potent, Bioavailable, Nonpeptide Cyclic U Hiv Protease Inhibitors
authors C.H.Chang
compound source
Molecule: Hiv-1 Protease
Chain: A, B
Engineered: Yes
 Organism_scientific: Human Immunodeficiency Virus 1
Organism_taxid: 11676
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 61
R_factor 0.193 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.800 62.800 83.500 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.80 Å
ligand CSO, XK2 BindingDB enzyme
related structures by homologous chain: 1G35, 1QBU
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceRational design of potent, bioavailable, nonpeptide cyclic ureas as HIV protease inhibitors., Lam PY, Jadhav PK, Eyermann CJ, Hodge CN, Ru Y, Bacheler LT, Meek JL, Otto MJ, Rayner MM, Wong YN, et al., Science 1994 Jan 21;263(5145):380-4. PMID:8278812
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (1hvr.pdb1.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 1HVR
  • CSU: Contacts of Structural Units for 1HVR
  • Likely Quarternary Molecular Structure file(s) for 1HVR
  • Retrieve 1HVR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HVR from S2C, [Save to disk]
    • View 1HVR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1HVR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HVR, from MSDmotif at EBI
  • Genome occurence of 1HVR's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hvra_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1hvrb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hvr_A] [1hvr] [1hvr_B]
  • SWISS-PROT database: [P04585]
  • Domain organization of [POL_HV1H2] by SWISSPFAM
    • Other resources with information on 1HVR
  • Community annotation for 1HVR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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