1I05 Transport Protein date Jan 28, 2001
title Crystal Structure Of Mouse Major Urinary Protein (Mup-I) Com With Hydroxy-Methyl-Heptanone
authors D.E.Timm, L.J.Baker, H.Mueller, L.Zidek, M.V.Novotny
compound source
Molecule: Major Urinary Protein I
Chain: A
Synonym: Alpha-2u-Globulin I
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Mup-I
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43 21 2
R_factor 0.194 R_Free 0.230
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.927 56.927 108.593 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand CD, LTL enzyme
related structures by homologous chain: 1I04, 1I06
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis of pheromone binding to mouse major urinary protein (MUP-I)., Timm DE, Baker LJ, Mueller H, Zidek L, Novotny MV, Protein Sci 2001 May;10(5):997-1004. PMID:11316880
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (1i05.pdb1.gz) 27 Kb
  • LPC: Ligand-Protein Contacts for 1I05
  • CSU: Contacts of Structural Units for 1I05
  • Likely Quarternary Molecular Structure file(s) for 1I05
  • Structure Factors (103 Kb)
  • Retrieve 1I05 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1I05 from S2C, [Save to disk]
  • Re-refined 1i05 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1I05 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1I05
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1I05, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1i05a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1i05] [1i05_A]
  • SWISS-PROT database: [P02762]
  • Domain organization of [MUP6_MOUSE] by SWISSPFAM
    • Other resources with information on 1I05
  • Community annotation for 1I05 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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