1IV7 Plant Protein date Mar 15, 2002
title Crystal Structure Of Single Chain Monellin
authors T.Tamada, Y.Kato, R.Kuroki
compound source
Molecule: Monellin
Chain: A, B
Engineered: Yes
Mutation: Yes
Other_details: Fusion Protein Concerning Chain A Comprise R 50 (Monellin, Chain B) And 52-96 (Monellin, Chain A), Inclu Glysine Linker. Fusion Protein Concerning Chain B Comprise 101-150 (Monellin, Chain B) And 152-196 (Monellin, Chain A) Including Glysine Linker.
Organism_scientific: Dioscoreophyllum Cumminsii
Organism_common: Serendipity Berry
Organism_taxid: 3457
Expression_system: Escherichia Coli Str. K12 Substr. W3110
Expression_system_taxid: 316407
Expression_system_strain: W3110
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pst6311
symmetry Space Group: P 1 2 1
R_factor 0.200 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.650 36.260 46.380 90.00 91.10 90.00
method X-Ray Diffractionresolution 1.82 Å
related structures by homologous chain: 1IV9, 1N98
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (1iv7.pdb1.gz) 17 Kb
  • Biological Unit Coordinates (1iv7.pdb2.gz) 17 Kb
  • CSU: Contacts of Structural Units for 1IV7
  • Likely Quarternary Molecular Structure file(s) for 1IV7
  • Retrieve 1IV7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IV7 from S2C, [Save to disk]
  • View 1IV7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1IV7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1IV7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1iv7a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1iv7b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1iv7] [1iv7_A] [1iv7_B]
  • SWISS-PROT database: [P02881] [P02882]
  • Domain organization of [MONA_DIOCU] [MONB_DIOCU] by SWISSPFAM
  • Other resources with information on 1IV7
  • Community annotation for 1IV7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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