1JN6	Immune System	date	Jul 23, 2001
title	Crystal Structure Of Fab-Estradiol Complexes
authors	C.Monnet, F.Bettsworth, E.A.Stura, M.H.Le Du, R.Menez, L.Derrien Justin, B.Gilquin, G.Sibai, N.Battail-Poirot, M.Jolivet, A.Menez M.Arnaud, F.Ducancel, J.B.Charbonnier
compound		source
Molecule: Monoclonal Anti-Estradiol 10g6d6 Fab Light Chain Chain: A Synonym: Fab 10g6 Light Chain		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Other_details: Ascetic Fluid
Molecule: Monoclonal Anti-Estradiol 10g6d6 Fab Heavy Chain Chain: B Synonym: Fab 10g6 Heavy Chain		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Other_details: Ascetic Fluid
symmetry	Space Group: P 21 21 21	R_factor 0.223 R_Free 0.305
crystal cell	length a length b length c angle alpha angle beta angle gamma 49.881 73.119 142.604 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.70 Å
related structures	by homologous chain: 1DBM, 1HQ4, 1OAX, 1OAZ
Gene Ontology	Chain Function Process Component A
Primary reference	Highly specific anti-estradiol antibodies: structural characterisation and binding diversity., Monnet C, Bettsworth F, Stura EA, Le Du MH, Menez R, Derrien L, Zinn-Justin S, Gilquin B, Sibai G, Battail-Poirot N, Jolivet M, Menez A, Arnaud M, Ducancel F, Charbonnier JB, J Mol Biol 2002 Jan 25;315(4):699-712. PMID:11812141

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk] Biological Unit Coordinates (1jn6.pdb1.gz) 64 Kb CSU: Contacts of Structural Units for 1JN6 Likely Quarternary Molecular Structure file(s) for 1JN6 Structure Factors (108 Kb) Retrieve 1JN6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JN6 from S2C, [Save to disk] Re-refined 1jn6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1JN6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1JN6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1JN6, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1jn6a1, region A:1-108 [Jmol] [rasmolscript] [script source]     - Domain d1jn6a2, region A:113-210 [Jmol] [rasmolscript] [script source]     - Domain d1jn6b1, region B:1-117 [Jmol] [rasmolscript] [script source]     - Domain d1jn6b2, region B:121-217 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1jn6_B] [1jn6_A] [1jn6] SWISS-PROT database: [P01843] [Q6PF95] Domain organization of [LAC1_MOUSE] [Q6PF95_MOUSE] by SWISSPFAM Domains found in 1JN6: [IG_like] [IGv ] by SMART

Other resources with information on 1JN6

Community annotation for 1JN6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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