1KCX	Signaling Protein	date	Nov 11, 2001
title	X-Ray Structure Of Nysgrc Target T-45
authors	R.C.Deo, E.F.Schmidt, S.M.Strittmatter, S.K.Burley, New York Sgx Center For Structural Genomics (Nysgxrc)
compound		source
Molecule: Dihydropyrimidinase Related Protein-1 Chain: A, B Fragment: Residues 8-525 Synonym: Drp-1, Crmp-1 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Gene: Crmp1 (8-525) Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Ut5600 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex6p1
symmetry	Space Group: C 2 2 21	R_factor 0.204 R_Free 0.233
crystal cell	length a length b length c angle alpha angle beta angle gamma 123.396 152.111 157.165 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.12 Å
related structures	by homologous chain: 1N0W
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural bases for CRMP function in plexin-dependent semaphorin3A signaling., Deo RC, Schmidt EF, Elhabazi A, Togashi H, Burley SK, Strittmatter SM, EMBO J 2004 Jan 14;23(1):9-22. Epub 2003 Dec 18. PMID:14685275

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (164 Kb) [Save to disk] Biological Unit Coordinates (1kcx.pdb1.gz) 159 Kb CSU: Contacts of Structural Units for 1KCX Likely Quarternary Molecular Structure file(s) for 1KCX Retrieve 1KCX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1KCX from S2C, [Save to disk]

View 1KCX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1KCX

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1KCX, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1kcxa1, region A:15-66,A:401-490 [Jmol] [rasmolscript] [script source]     - Domain d1kcxa2, region A:67-400 [Jmol] [rasmolscript] [script source]     - Domain d1kcxb1, region B:15-66,B:401-490 [Jmol] [rasmolscript] [script source]     - Domain d1kcxb2, region B:67-400 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1kcx_B] [1kcx_A] [1kcx] SWISS-PROT database: [P97427] Domain organization of [DPYL1_MOUSE] by SWISSPFAM

Other resources with information on 1KCX

Community annotation for 1KCX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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