1N8W	Lyase	date	Nov 21, 2002
title	Biochemical And Structural Studies Of Malate Synthase From Mycobacterium Tuberculosis
authors	C.V.Smith, C.C.Huang, A.Miczak, D.G.Russell, J.C.Sacchettini, K.H Bentrup, Tb Structural Genomics Consortium (Tbsgc)
compound		source
Molecule: Probable Malate Synthase G Chain: A, B Ec: 4.1.3.2 Engineered: Yes		Organism_scientific: Mycobacterium Tuberculosis Organism_taxid: 1773 Gene: Glcb Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
symmetry	Space Group: P 41 21 2	R_factor 0.190 R_Free 0.287
crystal cell	length a length b length c angle alpha angle beta angle gamma 120.985 120.985 232.787 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	COA, GLV, MG, MLT, SO4	enzyme	Lyase E.C.4.1.3.2 BRENDA
related structures	by homologous chain: 1N8I
Gene Ontology	Chain Function Process Component A, B
Primary reference	Biochemical and structural studies of malate synthase from Mycobacterium tuberculosis., Smith CV, Huang CC, Miczak A, Russell DG, Sacchettini JC, Honer zu Bentrup K, J Biol Chem 2003 Jan 17;278(3):1735-43. PMID:12393860

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (235 Kb) [Save to disk] Biological Unit Coordinates (1n8w.pdb1.gz) 118 Kb Biological Unit Coordinates (1n8w.pdb2.gz) 115 Kb LPC: Ligand-Protein Contacts for 1N8W CSU: Contacts of Structural Units for 1N8W Likely Quarternary Molecular Structure file(s) for 1N8W Retrieve 1N8W in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1N8W from S2C, [Save to disk]

View 1N8W in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1N8W

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1N8W, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1n8wa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1n8wb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1n8w_B] [1n8w_A] [1n8w] SWISS-PROT database: [P0A5J4] Domain organization of [MASZ_MYCTU] by SWISSPFAM

Other resources with information on 1N8W

Community annotation for 1N8W at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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