1OI1	Mbt	date	Jun 04, 2003
title	Crystal Structure Of The Mbt Domains Of Human Scml2
authors	A.Sathyamurthy, M.D.Allen, A.G.Murzin, M.Bycroft
compound		source
Molecule: Scml2 Protein Chain: A Fragment: Residues 24-243 Mbt Domain Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_variant: C41 Expression_system_vector: Prseta Expression_system_plasmid: Prseta Other_details: Cdna Subcloned
symmetry	Space Group: C 1 2 1	R_factor 0.171 R_Free 0.204
crystal cell	length a length b length c angle alpha angle beta angle gamma 118.762 47.696 41.493 90.00 100.29 90.00
method	X-Ray Diffraction	resolution	1.78 Å
ligand	PEG	enzyme
related structures	by homologous chain: 2BIV
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of the malignant brain tumor (MBT) repeats in Sex Comb on Midleg-like 2 (SCML2)., Sathyamurthy A, Allen MD, Murzin AG, Bycroft M, J Biol Chem. 2003 Nov 21;278(47):46968-73. Epub 2003 Sep 1. PMID:12952983

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk] Biological Unit Coordinates (1oi1.pdb1.gz) 40 Kb LPC: Ligand-Protein Contacts for 1OI1 CSU: Contacts of Structural Units for 1OI1 Likely Quarternary Molecular Structure file(s) for 1OI1 Structure Factors (155 Kb) Retrieve 1OI1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1OI1 from S2C, [Save to disk] Re-refined 1oi1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1OI1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1OI1

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1OI1, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1oi1a2, region A:140-243 [Jmol] [rasmolscript] [script source]     - Domain d1oi1a1, region A:33-135 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1oi1] [1oi1_A] SWISS-PROT database: [Q9UQR0] Domain organization of [SCML2_HUMAN] by SWISSPFAM Domain found in 1OI1: [MBT ] by SMART

Other resources with information on 1OI1

Community annotation for 1OI1 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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