1PGN	Oxidoreductase (Choh(D)-Nadp+(A))	date	Jul 18, 1994
title	Crystallographic Study Of Coenzyme, Coenzyme Analogue And Su Binding In 6-Phosphogluconate Dehydrogenase: Implications F Specificity And The Enzyme Mechanism
authors	M.J.Adams, C.Phillips, S.Gover
compound		source
Molecule: 6-Phosphogluconate Dehydrogenase Chain: A Ec: 1.1.1.44 Engineered: Yes		Organism_scientific: Ovis Aries Organism_common: Sheep Organism_taxid: 9940
symmetry	Space Group: C 2 2 21	R_factor 0.204 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 72.740 148.400 102.350 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	NBP, POP, SO4	enzyme	Oxidoreductase E.C.1.1.1.44 BRENDA
related structures	by homologous chain: 1PGP, 2PGD
Gene Ontology	Chain Function Process Component A
Primary reference	Crystallographic study of coenzyme, coenzyme analogue and substrate binding in 6-phosphogluconate dehydrogenase: implications for NADP specificity and the enzyme mechanism., Adams MJ, Ellis GH, Gover S, Naylor CE, Phillips C, Structure 1994 Jul 15;2(7):651-68. PMID:7922042

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk] Biological Unit Coordinates (1pgn.pdb1.gz) 163 Kb LPC: Ligand-Protein Contacts for 1PGN CSU: Contacts of Structural Units for 1PGN Likely Quarternary Molecular Structure file(s) for 1PGN Structure Factors (189 Kb) Retrieve 1PGN in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1PGN from S2C, [Save to disk] Re-refined 1pgn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1PGN in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1PGN

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1PGN, from MSDmotif at EBI Genome occurence of 1PGN's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1pgn_2, region 1-176 [Jmol] [rasmolscript] [script source]     - Domain d1pgn_1, region 177-473 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1pgn] [1pgn_A] SWISS-PROT database: [P00349] Domain organization of [6PGD_SHEEP] by SWISSPFAM Domain found in 1PGN: [6PGD ] by SMART

Other resources with information on 1PGN

Community annotation for 1PGN at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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