1QPG	Phosphotransferase (Carboxyl Acceptor)	date	Jan 04, 1996
title	3-Phosphoglycerate Kinase, Mutation R65q
authors	T.M.Mcphillips, B.T.Hsu, M.A.Sherman, M.T.Mas, D.C.Rees
compound		source
Molecule: 3-Phosphoglycerate Kinase Chain: A Synonym: Pgk Ec: 2.7.2.3 Engineered: Yes Mutation: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Expression_system: Saccharomyces Cerevisiae Expression_system_common: Baker'S Yeast Expression_system_taxid: 4932 Expression_system_strain: Pgk-Xsb44-35d Expression_system_plasmid: Yep9t-Pgk
symmetry	Space Group: C 1 2 1	R_factor 0.185 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 96.000 70.100 82.300 90.00 122.20 90.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	3PG, MAP BindingDB	enzyme	Transferase E.C.2.7.2.3 BRENDA
related structures	by homologous chain: 1FW8, 3PGK
Gene Ontology	Chain Function Process Component A protein-disulfide reductase ...
Primary reference	Structure of the R65Q mutant of yeast 3-phosphoglycerate kinase complexed with Mg-AMP-PNP and 3-phospho-D-glycerate., McPhillips TM, Hsu BT, Sherman MA, Mas MT, Rees DC, Biochemistry 1996 Apr 2;35(13):4118-27. PMID:8672447

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk] Biological Unit Coordinates (1qpg.pdb1.gz) 66 Kb LPC: Ligand-Protein Contacts for 1QPG CSU: Contacts of Structural Units for 1QPG Likely Quarternary Molecular Structure file(s) for 1QPG Retrieve 1QPG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1QPG from S2C, [Save to disk]

View 1QPG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1QPG

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1QPG, from MSDmotif at EBI Genome occurence of 1QPG's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1qpg__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1qpg_A] [1qpg] SWISS-PROT database: [P00560] Domain organization of [PGK_YEAST] by SWISSPFAM

Other resources with information on 1QPG

Community annotation for 1QPG at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---