1RJL	Immune System	date	Nov 19, 2003
title	Structure Of The Complex Between Ospb-Ct And Bactericidal Fa
authors	M.Becker, J.Bunikis, B.D.Lade, J.J.Dunn, A.G.Barbour, C.L.Lawson
compound		source
Molecule: Fab H6831 L-Chain Chain: A		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Strain: Balb-C
Molecule: Fab H6831 H-Chain Chain: B		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Strain: Balb-C
Molecule: Outer Surface Protein B Chain: C Engineered: Yes		Organism_scientific: Borrelia Burgdorferi Organism_common: Lyme Disease Spirochete Organism_taxid: 139 Gene: Ospb, Bba16 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl2(De3)Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet9c
Molecule: Outer Surface Protein B Chain: D Fragment: 5-Residue Polyunknown Fragment Engineered: Yes		Organism_scientific: Borrelia Burgdorferi Organism_common: Lyme Disease Spirochete Organism_taxid: 139 Gene: Ospb, Bba16 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl2(De3)Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet9c
symmetry	Space Group: C 1 2 1	R_factor 0.191 R_Free 0.235
crystal cell	length a length b length c angle alpha angle beta angle gamma 186.286 37.271 87.939 90.00 90.66 90.00
method	X-Ray Diffraction	resolution	2.60 Å
related structures	by homologous chain: 1BQL, 1FJ1, 1I9J, 1P4P
Gene Ontology	Chain Function Process Component C
Primary reference	Structural Investigation of Borrelia burgdorferi OspB, a BactericidalFab Target., Becker M, Bunikis J, Lade BD, Dunn JJ, Barbour AG, Lawson CL, J Biol Chem 2005 Apr 29;280(17):17363-70. Epub 2005 Feb 15. PMID:15713683

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk] Biological Unit Coordinates (1rjl.pdb1.gz) 85 Kb CSU: Contacts of Structural Units for 1RJL Likely Quarternary Molecular Structure file(s) for 1RJL Structure Factors (199 Kb) Retrieve 1RJL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1RJL from S2C, [Save to disk] Re-refined 1rjl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1RJL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1RJL

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1RJL, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1rjla1, region A:1-107 [Jmol] [rasmolscript] [script source]     - Domain d1rjla2, region A:108-212 [Jmol] [rasmolscript] [script source]     - Domain d1rjlb1, region B:1-120 [Jmol] [rasmolscript] [script source]     - Domain d1rjlb2, region B:121-221 [Jmol] [rasmolscript] [script source]     - Domain d1rjlc_, region C [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1rjl_B] [1rjl_C] [1rjl_A] [1rjl] [1rjl_D] SWISS-PROT database: [P17739] Domain organization of [OSPB1_BORBU] by SWISSPFAM Domains found in 1RJL: [IG_like] [IGv ] by SMART

Other resources with information on 1RJL

Community annotation for 1RJL at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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