1RZO	Hydrolase	date	Dec 26, 2003
title	Agglutinin From Ricinus Communis With Galactoaza
authors	A.G.Gabdoulkhakov, Y.Savochkina, N.Konareva, R.Krauspenhaar, S.S S.V.Nikonov, W.Voelter, C.Betzel, A.M.Mikhailov
compound		source
Molecule: Agglutinin Chain: A, C Fragment: A Chain Synonym: Rca, Rrna N-Glycosidase Ec: 3.2.2.22		Organism_scientific: Ricinus Communis Organism_common: Castor Bean Organism_taxid: 3988
Molecule: Agglutinin Chain: B, D Fragment: B Chain Synonym: Rca		Organism_scientific: Ricinus Communis Organism_common: Castor Bean Organism_taxid: 3988
symmetry	Space Group: P 32	R_factor 0.225 R_Free 0.276
crystal cell	length a length b length c angle alpha angle beta angle gamma 97.630 97.630 207.827 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.63 Å
ligand	GAL, SO4	enzyme	Hydrolase E.C.3.2.2.22 BRENDA
related structures	by homologous chain: 1IL4, 1OBT, 2AAI
Gene Ontology	Chain Function Process Component A, C D, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (181 Kb) [Save to disk] Biological Unit Coordinates (1rzo.pdb1.gz) 91 Kb Biological Unit Coordinates (1rzo.pdb2.gz) 88 Kb LPC: Ligand-Protein Contacts for 1RZO CSU: Contacts of Structural Units for 1RZO Likely Quarternary Molecular Structure file(s) for 1RZO Retrieve 1RZO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1RZO from S2C, [Save to disk]

View 1RZO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1RZO

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1RZO, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1rzoa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1rzob1, region B:2001-2135 [Jmol] [rasmolscript] [script source]     - Domain d1rzob2, region B:2136-2262 [Jmol] [rasmolscript] [script source]     - Domain d1rzoc_, region C [Jmol] [rasmolscript] [script source]     - Domain d1rzod1, region D:2001-2135 [Jmol] [rasmolscript] [script source]     - Domain d1rzod2, region D:2136-2262 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1rzo_B] [1rzo_D] [1rzo] [1rzo_A] [1rzo_C] SWISS-PROT database: [P06750] Domain organization of [AGGL_RICCO] by SWISSPFAM Domain found in 1RZO: [RICIN ] by SMART

Other resources with information on 1RZO

Community annotation for 1RZO at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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