1TDI Transferase date May 22, 2004
title Crystal Structure Of Hgsta3-3 In Complex With Glutathione
authors Y.Gu, J.Guo, A.Pal, S.S.Pan, P.Zimniak, S.V.Singh, X.Ji
compound source
Molecule: Glutathione S-Transferase A3-3
Chain: A, B
Synonym: Gst Class-Alpha, Hgsta3-3
Ec: 2.5.1.18
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gsta3
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11a
symmetry Space Group: P 1 21 1
R_factor 0.228 R_Free 0.252
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.985 95.588 114.039 90.00 90.14 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand GSH enzyme Transferase E.C.2.5.1.18 BRENDA
related structures by homologous chain: 1EV9, 1GSD
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of human glutathione S-transferase A3-3 and mechanistic implications for its high steroid isomerase activity., Gu Y, Guo J, Pal A, Pan SS, Zimniak P, Singh SV, Ji X, Biochemistry 2004 Dec 21;43(50):15673-9. PMID:15595823
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk]
  • Biological Unit Coordinates (1tdi.pdb1.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 1TDI
  • CSU: Contacts of Structural Units for 1TDI
  • Likely Quarternary Molecular Structure file(s) for 1TDI
  • Structure Factors (756 Kb)
  • Retrieve 1TDI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TDI from S2C, [Save to disk]
  • Re-refined 1tdi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1TDI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TDI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TDI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tdi_B] [1tdi_A] [1tdi]
  • SWISS-PROT database: [Q16772]
  • Domain organization of [GSTA3_HUMAN] by SWISSPFAM
  • Other resources with information on 1TDI
  • Community annotation for 1TDI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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