1TIM Isomerase(Intramolecular Oxidoreductase) date Sep 01, 1976
title Structure Of Triose Phosphate Isomerase From Chicken Muscle
authors D.W.Banner, A.C.Bloomer, G.A.Petsko, D.C.Phillips, I.A.Wilson
compound source
Molecule: Triosephosphate Isomerase
Chain: A, B
Ec: 5.3.1.1
Engineered: Yes
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
symmetry Space Group: P 21 21 21
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.010 74.760 61.740 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand
enzyme Isomerase E.C.5.3.1.1 BRENDA
related structures by homologous chain: 1SU5, 8TIM
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceAtomic coordinates for triose phosphate isomerase from chicken muscle., Banner DW, Bloomer A, Petsko GA, Phillips DC, Wilson IA, Biochem Biophys Res Commun 1976 Sep 7;72(1):146-55. PMID:985462
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk]
  • Biological Unit Coordinates (1tim.pdb1.gz) 64 Kb
  • CSU: Contacts of Structural Units for 1TIM
  • Likely Quarternary Molecular Structure file(s) for 1TIM
  • Retrieve 1TIM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TIM from S2C, [Save to disk]
  • View 1TIM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TIM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TIM, from MSDmotif at EBI
  • Genome occurence of 1TIM's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tima_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1timb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tim_B] [1tim_A] [1tim]
  • SWISS-PROT database: [P00940]
  • Domain organization of [TPIS_CHICK] by SWISSPFAM
  • Other resources with information on 1TIM
  • Community annotation for 1TIM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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