1TXX Oxidoreductase date Apr 07, 1999
title Active-Site Variant Of E.Coli Thioredoxin
authors L.W.Schultz, P.T.Chivers, R.T.Raines
compound source
Molecule: Protein (Thioredoxin)
Chain: A
Ec: 1.8.-.-
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Cellular_location: Cytoplasm
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21de3
Expression_system_cellular_location: Periplasm
symmetry Space Group: P 43 21 2
R_factor 0.171 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.530 42.530 105.240 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand CU enzyme Oxidoreductase E.C.1.8 BRENDA
related structures by homologous chain: 1TK5, 1X9M
Gene
Ontology
ChainFunctionProcessComponent
A
  • DNA polymerase processivity ...


  • Primary referenceThe CXXC motif: crystal structure of an active-site variant of Escherichia coli thioredoxin., Schultz LW, Chivers PT, Raines RT, Acta Crystallogr D Biol Crystallogr 1999 Sep;55 ( Pt 9):1533-8. PMID:10489448
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk]
  • Biological Unit Coordinates (1txx.pdb1.gz) 19 Kb
  • LPC: Ligand-Protein Contacts for 1TXX
  • CSU: Contacts of Structural Units for 1TXX
  • Likely Quarternary Molecular Structure file(s) for 1TXX
  • Structure Factors (42 Kb)
  • Retrieve 1TXX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TXX from S2C, [Save to disk]
  • Re-refined 1txx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1TXX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TXX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TXX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1txxa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1txx_A] [1txx]
  • SWISS-PROT database: [P0AA25]
  • Domain organization of [THIO_ECOLI] by SWISSPFAM
  • Other resources with information on 1TXX
  • Community annotation for 1TXX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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