1U10	Hydrolase	date	Jul 14, 2004
title	Mepa, Active Form With Zn In P1
authors	M.Marcyjaniak, S.G.Odintsov, I.Sabala, M.Bochtler
compound		source
Molecule: Penicillin-Insensitive Murein Endopeptidase Chain: A, B, C, D, E, F Synonym: D-Alanyl-D-Alanine-Endopeptidase, Dd-Endopeptidase Ec: 3.4.99.- Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Mepa Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
symmetry	Space Group: P 1	R_factor 0.234 R_Free 0.266
crystal cell	length a length b length c angle alpha angle beta angle gamma 35.613 77.988 127.663 93.15 95.93 90.75
method	X-Ray Diffraction	resolution	2.40 Å
ligand	MSE, SO4, ZN	enzyme	Hydrolase E.C.3.4.99 BRENDA
related structures	by homologous chain: 1TZP
Gene Ontology	Chain Function Process Component F, A, D, C, E, B
Primary reference	Peptidoglycan amidase MepA is a LAS metallopeptidase., Marcyjaniak M, Odintsov SG, Sabala I, Bochtler M, J Biol Chem 2004 Jul 29;. PMID:15292190

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (233 Kb) [Save to disk] Biological Unit Coordinates (1u10.pdb1.gz) 77 Kb Biological Unit Coordinates (1u10.pdb2.gz) 78 Kb Biological Unit Coordinates (1u10.pdb3.gz) 78 Kb LPC: Ligand-Protein Contacts for 1U10 CSU: Contacts of Structural Units for 1U10 Likely Quarternary Molecular Structure file(s) for 1U10 Structure Factors (1015 Kb) Retrieve 1U10 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1U10 from S2C, [Save to disk] Re-refined 1u10 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1U10 in 3D

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Visual 3D analysis of 1U10

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1U10, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1u10a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1u10b_, region B [Jmol] [rasmolscript] [script source]     - Domain d1u10c_, region C [Jmol] [rasmolscript] [script source]     - Domain d1u10d_, region D [Jmol] [rasmolscript] [script source]     - Domain d1u10e_, region E [Jmol] [rasmolscript] [script source]     - Domain d1u10f_, region F [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1u10_D] [1u10_B] [1u10_E] [1u10_F] [1u10] [1u10_C] [1u10_A] SWISS-PROT database: [P0C0T5] Domain organization of [MEPA_ECOLI] by SWISSPFAM

Other resources with information on 1U10

Community annotation for 1U10 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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