1UAT Electron Transport date Mar 19, 2003
title The Significance Of The Flexible Loop In The Azurin (Az-Iso2 Obligate Methylotroph Methylomonas Sp. Strain J
authors T.Inoue, S.Suzuki, N.Nisho, K.Yamaguchi, K.Kataoka, J.Tobari, X.Yo S.Hamanaka, H.Matsumura, Y.Kai
compound source
Molecule: Azurin Iso-2
Chain: A
Engineered: Yes
 Organism_scientific: Methylomonas Sp. J
Organism_taxid: 32038
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.159 R_Free 0.195
crystal
cell
length a length b length c angle alpha angle beta angle gamma
31.520 62.550 135.460 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand CU, SO4 enzyme
related structures by homologous chain: 1CUO
Gene
Ontology
ChainFunctionProcessComponent
A
  • electron transfer activity


    • Primary referenceThe significance of the flexible loop in the azurin (Az-iso2) from the obligate methylotroph Methylomonas sp. strain J., Inoue T, Suzuki S, Nishio N, Yamaguchi K, Kataoka K, Tobari J, Yong X, Hamanaka S, Matsumura H, Kai Y, J Mol Biol 2003 Oct 10;333(1):117-24. PMID:14516747
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk]
  • Biological Unit Coordinates (1uat.pdb1.gz) 22 Kb
  • Biological Unit Coordinates (1uat.pdb2.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 1UAT
  • CSU: Contacts of Structural Units for 1UAT
  • Likely Quarternary Molecular Structure file(s) for 1UAT
  • Structure Factors (83 Kb)
  • Retrieve 1UAT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UAT from S2C, [Save to disk]
  • Re-refined 1uat structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1UAT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1UAT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UAT, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1uata_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uat_A] [1uat]
  • SWISS-PROT database: [P12335]
  • Domain organization of [AZUR2_METJ] by SWISSPFAM
    • Other resources with information on 1UAT
  • Community annotation for 1UAT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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