1XGE Hydrolase date Sep 17, 2004
title Dihydroorotase From Escherichia Coli: Loop Movement And Coop Between Subunits
authors M.Lee, C.W.Chan, J.M.Guss, R.I.Christopherson, M.J.Maher
compound source
Molecule: Dihydroorotase
Chain: A, B
Synonym: Dhoase
Ec: 3.5.2.3
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Pyrc
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Xl1 Blue
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pbs +
symmetry Space Group: P 21 21 21
R_factor 0.168 R_Free 0.211
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.582 78.826 180.222 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand DOR, KCX, NCD, ZN enzyme Hydrolase E.C.3.5.2.3 BRENDA
related structures by homologous chain: 1J79
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDihydroorotase from Escherichia coli: Loop Movement and Cooperativity between Subunits., Lee M, Chan CW, Mitchell Guss J, Christopherson RI, Maher MJ, J Mol Biol 2005 May 6;348(3):523-33. PMID:15826651
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (131 Kb) [Save to disk]
  • Biological Unit Coordinates (1xge.pdb1.gz) 125 Kb
  • LPC: Ligand-Protein Contacts for 1XGE
  • CSU: Contacts of Structural Units for 1XGE
  • Likely Quarternary Molecular Structure file(s) for 1XGE
  • Structure Factors (417 Kb)
  • Retrieve 1XGE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XGE from S2C, [Save to disk]
  • Re-refined 1xge structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1XGE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XGE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XGE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xge_A] [1xge_B] [1xge]
  • SWISS-PROT database: [P05020]
  • Domain organization of [PYRC_ECOLI] by SWISSPFAM
  • Other resources with information on 1XGE
  • Community annotation for 1XGE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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