1XUB	Biosynthetic Protein	date	Oct 26, 2004
title	Structure And Function Of The Phenazine Biosynthetic Protein Pseudomonas Fluorescens
authors	W.Blankenfeldt, A.P.Kuzin, T.Skarina, Y.Korniyenko, L.Tong, P.Bay P.Janning, L.S.Thomashow, D.V.Mavrodi
compound		source
Molecule: Phenazine Biosynthesis Protein Phzf Chain: A Engineered: Yes Mutation: Yes		Organism_scientific: Pseudomonas Fluorescens Organism_taxid: 294 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
symmetry	Space Group: P 32 2 1	R_factor 0.133 R_Free 0.160
crystal cell	length a length b length c angle alpha angle beta angle gamma 56.128 56.128 154.423 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.30 Å
ligand	SO4	enzyme
related structures	by homologous chain: 1U1W
Gene Ontology	Chain Function Process Component A
Primary reference	Structure and function of the phenazine biosynthetic protein PhzF from Pseudomonas fluorescens., Blankenfeldt W, Kuzin AP, Skarina T, Korniyenko Y, Tong L, Bayer P, Janning P, Thomashow LS, Mavrodi DV, Proc Natl Acad Sci U S A 2004 Nov 23;101(47):16431-6. Epub 2004 Nov 15. PMID:15545603

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk] Biological Unit Coordinates (1xub.pdb1.gz) 202 Kb LPC: Ligand-Protein Contacts for 1XUB CSU: Contacts of Structural Units for 1XUB Likely Quarternary Molecular Structure file(s) for 1XUB Structure Factors (441 Kb) Retrieve 1XUB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1XUB from S2C, [Save to disk] Re-refined 1xub structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1XUB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1XUB

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1XUB from the CEP Server. Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1XUB, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1xuba1, region A:1-128 [Jmol] [rasmolscript] [script source]     - Domain d1xuba2, region A:129-278 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1xub_A] [1xub] SWISS-PROT database: [Q51792] Domain organization of [PHZF_PSEFL] by SWISSPFAM

Other resources with information on 1XUB

Community annotation for 1XUB at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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