1Y19	Structural Protein, Signaling Protein	date	Nov 17, 2004
title	Structural Basis For Phosphatidylinositol Phosphate Kinase T Gamma Binding To Talin At Focal Adhesions
authors	J.M.De Pereda, K.Wegener, E.Santelli, N.Bate, M.H.Ginsberg, D.R.C I.D.Campbell, R.C.Liddington
compound		source
Molecule: Phosphatidylinositol-4-Phosphate 5-Kinase, Type 1 Chain: A, C, E, G, I, K Fragment: C-Terminal Region Engineered: Yes Other_details: Chimera Of Chain Ab, Cd, Ef, Gh, Ij, K		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b Other_details: Forms Chimera With Talin At The N-Terminus
Molecule: Talin 1 Chain: B, D, F, H, J, L Fragment: F2 And F3 Subdomains Of The Ferm Domain Engineered: Yes Other_details: Chimera Of Chain Ab, Cd, Ef, Gh, Ij, K		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Gene: Tln1, Tln Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b Other_details: Forms Chimera With Phosphatidyl Inositol Kin Gamma At The C-Terminus
symmetry	Space Group: P 32	R_factor 0.253 R_Free 0.286
crystal cell	length a length b length c angle alpha angle beta angle gamma 118.102 118.102 93.308 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.60 Å
related structures	by homologous chain: 1MK7, 1MK9
Gene Ontology	Chain Function Process Component H, F, J, D, L, B
Primary reference	Structural bases for phosphatidylinositol phosphate kinase type I-gamma binding to talin at focal adhesions., de Pereda JM, Wegener K, Santelli E, Bate N, Ginsberg MH, Critchley DR, Campbell ID, Liddington RC, J Biol Chem 2004 Dec 28;. PMID:15623515

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (214 Kb) [Save to disk] Biological Unit Coordinates (1y19.pdb1.gz) 37 Kb Biological Unit Coordinates (1y19.pdb2.gz) 37 Kb Biological Unit Coordinates (1y19.pdb3.gz) 37 Kb Biological Unit Coordinates (1y19.pdb4.gz) 38 Kb Biological Unit Coordinates (1y19.pdb5.gz) 37 Kb Biological Unit Coordinates (1y19.pdb6.gz) 37 Kb CSU: Contacts of Structural Units for 1Y19 Likely Quarternary Molecular Structure file(s) for 1Y19 Structure Factors (328 Kb) Retrieve 1Y19 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1Y19 from S2C, [Save to disk] Re-refined 1y19 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1Y19 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1Y19

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1Y19, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1y19b1, region B:209-308 [Jmol] [rasmolscript] [script source]     - Domain d1y19b2, region B:309-400 [Jmol] [rasmolscript] [script source]     - Domain d1y19d1, region D:209-308 [Jmol] [rasmolscript] [script source]     - Domain d1y19d2, region D:309-400 [Jmol] [rasmolscript] [script source]     - Domain d1y19f1, region F:209-308 [Jmol] [rasmolscript] [script source]     - Domain d1y19f2, region F:309-400 [Jmol] [rasmolscript] [script source]     - Domain d1y19h1, region H:209-308 [Jmol] [rasmolscript] [script source]     - Domain d1y19h2, region H:309-400 [Jmol] [rasmolscript] [script source]     - Domain d1y19j1, region J:209-308 [Jmol] [rasmolscript] [script source]     - Domain d1y19j2, region J:309-400 [Jmol] [rasmolscript] [script source]     - Domain d1y19l1, region L:209-308 [Jmol] [rasmolscript] [script source]     - Domain d1y19l2, region L:309-400 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1y19_H] [1y19_B] [1y19_E] [1y19_I] [1y19_D] [1y19_G] [1y19] [1y19_A] [1y19_J] [1y19_K] [1y19_L] [1y19_F] [1y19_C] SWISS-PROT database: [O70161] [P26039] Domain organization of [PI51C_MOUSE] [TLN1_MOUSE] by SWISSPFAM Domains found in 1Y19: [B41] [IRS ] by SMART

Other resources with information on 1Y19

Community annotation for 1Y19 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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