1AG5 Dna date Apr 01, 1997
title The Solution Structure Of An Aflatoxin B1 Epoxide Adduct At Position Of Guanine Opposite An Adenine In The Complementar Of An Oligodeoxynucleotide Duplex, Nmr, Minimized Average S
authors D.S.Johnson, M.P.Stone
compound source
Molecule: Dna (5'-D(Cpcpaptpcpgpaptpcpc)-3')
Chain: A
Engineered: Yes
Other_details: 8,9-Dihydro-8-(N7-Guanyl)-9-Hydroxyaflatoxin Opposite Cpa In The Complementary Strand;
Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630

Molecule: Dna (5'-D(Gpgpaptpcpapgpaptpgpg)-3')
Chain: B
Engineered: Yes
Other_details: 8,9-Dihydro-8-(N7-Guanyl)-9-Hydroxyaflatoxin Opposite Cpa In The Complementary Strand

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
methodSolution NMR
ligand AFN enzyme
Primary referenceRefined solution structure of 8,9-dihydro-8-(N7-guanyl)-9-hydroxyaflatoxin B1 opposite CpA in the complementary strand of an oligodeoxynucleotide duplex as determined by 1H NMR., Johnston DS, Stone MP, Biochemistry 1995 Oct 31;34(43):14037-50. PMID:7578001
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (16 Kb) [Save to disk]
  • Biological Unit Coordinates (1ag5.pdb1.gz) 13 Kb
  • LPC: Ligand-Protein Contacts for 1AG5
  • CSU: Contacts of Structural Units for 1AG5
  • Retrieve 1AG5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AG5 from S2C, [Save to disk]
  • View 1AG5 in 3D
  • Proteopedia, because life has more than 2D.
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  • Visual 3D analysis of 1AG5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1AG5, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ag5_A] [1ag5] [1ag5_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 1AG5
  • Community annotation for 1AG5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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