1AGY Serine Esterase date Mar 26, 1997
title The 1.15 Angstrom Refined Structure Of Fusarium Solani Pisi
authors A.Nicolas, C.Martinez, C.Cambillau
compound source
Molecule: Cutinase
Chain: A
Ec: 3.1.1.-
Engineered: Yes
Organism_scientific: Nectria Haematococca Mpvi
Organism_taxid: 70791
Strain: Mpvi
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.175 R_Free 0.197
crystal
cell
length a length b length c angle alpha angle beta angle gamma
35.120 67.360 37.050 90.00 93.90 90.00
method X-Ray Diffractionresolution 1.15 Å
ligand
enzyme Hydrolase E.C.3.1.1 BRENDA
related structures by homologous chain: 1CEX, 1CUS
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAtomic resolution (1.0 A) crystal structure of Fusarium solani cutinase: stereochemical analysis., Longhi S, Czjzek M, Lamzin V, Nicolas A, Cambillau C, J Mol Biol. 1997 May 16;268(4):779-99. PMID:9175860
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk]
  • Biological Unit Coordinates (1agy.pdb1.gz) 79 Kb
  • CSU: Contacts of Structural Units for 1AGY
  • Likely Quarternary Molecular Structure file(s) for 1AGY
  • Structure Factors (404 Kb)
  • Retrieve 1AGY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AGY from S2C, [Save to disk]
  • Re-refined 1agy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1AGY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1AGY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1AGY from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1AGY, from MSDmotif at EBI
  • Genome occurence of 1AGY's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1agy__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1agy] [1agy_A]
  • SWISS-PROT database: [P00590]
  • Domain organization of [CUTI1_FUSSO] by SWISSPFAM
  • Domain found in 1AGY: [Cutinase ] by SMART
  • Other resources with information on 1AGY
  • Community annotation for 1AGY at PDBWiki (http://pdbwiki.org)
  • LED, table of lipase structures from Lipase Engineering Database.
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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