1AXM	Growth Factor	date	Oct 16, 1997
title	Heparin-Linked Biologically-Active Dimer Of Fibroblast Growt
authors	A.D.Digabriele, I.Lax, D.I.Chen, C.M.Svahn, M.Jaye, J.Schlessinge W.A.Hendrickson
compound		source
Molecule: Acidic Fibroblast Growth Factor Chain: A, B, C, D, E, F Synonym: Fgf-1 Engineered: Yes Other_details: For Each Of The Decasaccharide Chains In The Asymmetric Unit, Five Monosaccharide Units Are Disordered		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Cell_line: Jm109 De3 Organ: Brain Stem Tissue: Nerve Cell: Endothelial Cellular_location: Extracellular Matrix Gene: Ecgf Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Jm109 Expression_system_cell_line: Jm109 De3 Expression_system_cellular_location: Cytoplasm Expression_system_vector_type: Bacterial Expression_system_vector: Escherichia Coli Expression_system_plasmid: Pet-3a
symmetry	Space Group: C 2 2 21	R_factor 0.217 R_Free 0.304
crystal cell	length a length b length c angle alpha angle beta angle gamma 87.690 158.050 190.580 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	IDS, MSE, SGN	enzyme
related structures	by homologous chain: 1E0O, 2AXM
Gene Ontology	Chain Function Process Component F, A, D, C, E, B
Primary reference	Structure of a heparin-linked biologically active dimer of fibroblast growth factor., DiGabriele AD, Lax I, Chen DI, Svahn CM, Jaye M, Schlessinger J, Hendrickson WA, Nature. 1998 Jun 25;393(6687):812-7. PMID:9655399

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk] Biological Unit Coordinates (1axm.pdb1.gz) 46 Kb Biological Unit Coordinates (1axm.pdb2.gz) 46 Kb Biological Unit Coordinates (1axm.pdb3.gz) 46 Kb LPC: Ligand-Protein Contacts for 1AXM CSU: Contacts of Structural Units for 1AXM Likely Quarternary Molecular Structure file(s) for 1AXM Retrieve 1AXM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1AXM from S2C, [Save to disk]

View 1AXM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1AXM

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1AXM, from MSDmotif at EBI Genome occurence of 1AXM's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1axma_, region A [Jmol] [rasmolscript] [script source]     - Domain d1axmb_, region B [Jmol] [rasmolscript] [script source]     - Domain d1axmc_, region C [Jmol] [rasmolscript] [script source]     - Domain d1axmd_, region D [Jmol] [rasmolscript] [script source]     - Domain d1axme_, region E [Jmol] [rasmolscript] [script source]     - Domain d1axmf_, region F [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1axm_D] [1axm_B] [1axm] [1axm_F] [1axm_C] [1axm_A] [1axm_E] SWISS-PROT database: [P05230] Domain organization of [FGF1_HUMAN] by SWISSPFAM Domain found in 1AXM: [FGF ] by SMART

Other resources with information on 1AXM

Community annotation for 1AXM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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