1BJP Isomerase date Jun 26, 1998
title Crystal Structure Of 4-Oxalocrotonate Tautomerase Inactivate Oxo-3-Pentynoate At 2.4 Angstroms Resolution
authors A.B.Taylor, R.M.Czerwinski, W.H.Johnson Junior, C.P.Whitman, M.L
compound source
Molecule: 4-Oxalocrotonate Tautomerase
Chain: A, B, C, D, E
Synonym: 4-Oxalocrotonate Isomerase
Ec: 5.3.2.-
Engineered: Yes
Organism_scientific: Pseudomonas Putida
Organism_taxid: 303
Strain: Mt-2
Atcc: Atcc 33015
Collection: Atcc 33015
Gene: Xylh
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: S606
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pbaot1
Expression_system_gene: Xylh
symmetry Space Group: H 3 2
R_factor 0.206 R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.700 78.700 314.600 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.40 Å
ligand OXP enzyme Isomerase E.C.5.3.2 BRENDA
related structures by homologous chain: 4OTB, 4OTC
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, E, B


Primary referenceCrystal structure of 4-oxalocrotonate tautomerase inactivated by 2-oxo-3-pentynoate at 2.4 A resolution: analysis and implications for the mechanism of inactivation and catalysis., Taylor AB, Czerwinski RM, Johnson WH Jr, Whitman CP, Hackert ML, Biochemistry 1998 Oct 20;37(42):14692-700. PMID:9778344
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (1bjp.pdb1.gz) 61 Kb
  • Biological Unit Coordinates (1bjp.pdb2.gz) 55 Kb
  • Biological Unit Coordinates (1bjp.pdb3.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 1BJP
  • CSU: Contacts of Structural Units for 1BJP
  • Likely Quarternary Molecular Structure file(s) for 1BJP
  • Retrieve 1BJP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BJP from S2C, [Save to disk]
  • View 1BJP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BJP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BJP, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bjpa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1bjpb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1bjpc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1bjpd_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1bjpe_, region E [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bjp_D] [1bjp] [1bjp_E] [1bjp_A] [1bjp_C] [1bjp_B]
  • SWISS-PROT database: [Q01468]
  • Domain organization of [4OT1_PSEPU] by SWISSPFAM
  • Other resources with information on 1BJP
  • Community annotation for 1BJP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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