1BQX Electron Transport date Aug 20, 1998
title Artificial Fe8s8 Ferredoxin: The D13c Variant Of Bacillus Sc Fe7s8 Ferredoxin
authors S.Aono, D.Bentrop, I.Bertini, G.Cosenza, C.Luchinat
compound source
Molecule: Protein (Ferredoxin)
Chain: A
Engineered: Yes
Mutation: Yes
 Organism_scientific: Bacillus Schlegelii
Organism_taxid: 1484
Atcc: Atcc 43741
Collection: Atcc 43741
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm 109
Expression_system_plasmid: Pkkfd D13c
methodSolution NMR
ligand SF4 enzyme
related structures by homologous chain: 1BD6, 1BWE
Gene
Ontology
ChainFunctionProcessComponent
A
  • electron transfer activity


    • Primary referenceSolution structure of an artificial Fe8S8 ferredoxin: the D13C variant of Bacillus schlegelii Fe7S8 ferredoxin., Aono S, Bentrop D, Bertini I, Cosenza G, Luchinat C, Eur J Biochem 1998 Dec 1;258(2):502-14. PMID:9874217
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (1bqx.pdb1.gz) 20 Kb
  • LPC: Ligand-Protein Contacts for 1BQX
  • CSU: Contacts of Structural Units for 1BQX
  • Original NMR restraints for 1BQX from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1BQX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BQX from S2C, [Save to disk]
    • View 1BQX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1BQX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BQX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bqxa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bqx_A] [1bqx]
  • SWISS-PROT database: [Q45560]
  • Domain organization of [FER_BACSC] by SWISSPFAM
    • Other resources with information on 1BQX
  • Community annotation for 1BQX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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  • Images from IMB Jena Image Library of Biological Macromolecules.

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