1BUN Toxin date Oct 15, 1995
title Structure Of Beta2-Bungarotoxin: Potassium Channel Binding By Kunitz Modules And Targeted Phospholipase Action
authors P.D.Kwong, N.Q.Mcdonald, P.B.Sigler, W.A.Hendrickson
compound source
Molecule: Beta2-Bungarotoxin
Chain: A
Synonym: Phosphatide Acyl-Hydrolase, Phosphatidylcholine 2- Acylhydrolase;
Ec: 3.1.1.4
Other_details: Numerous Natural Isoforms, This Is The Beta2 Isoform;
Organism_scientific: Bungarus Multicinctus
Organism_common: Many-Banded Krait
Organism_taxid: 8616
Tissue: Venom

Molecule: Beta2-Bungarotoxin
Chain: B
Synonym: Phosphatide Acyl-Hydrolase, Phosphatidylcholine 2- Acylhydrolase;
Ec: 3.1.1.4
Other_details: Numerous Natural Isoforms, This Is The Beta2 Isoform

Organism_scientific: Bungarus Multicinctus
Organism_common: Many-Banded Krait
Organism_taxid: 8616
Tissue: Venom
symmetry Space Group: P 43 2 2
R_factor 0.193 R_Free 0.281
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.600 52.600 177.500 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.45 Å
ligand NA enzyme Hydrolase E.C.3.1.1.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


  • B
  • serine-type endopeptidase in...
  • toxin activity


  • Primary referenceStructure of beta 2-bungarotoxin: potassium channel binding by Kunitz modules and targeted phospholipase action., Kwong PD, McDonald NQ, Sigler PB, Hendrickson WA, Structure 1995 Oct 15;3(10):1109-19. PMID:8590005
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • Biological Unit Coordinates (1bun.pdb1.gz) 32 Kb
  • LPC: Ligand-Protein Contacts for 1BUN
  • CSU: Contacts of Structural Units for 1BUN
  • Likely Quarternary Molecular Structure file(s) for 1BUN
  • Retrieve 1BUN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BUN from S2C, [Save to disk]
  • View 1BUN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BUN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BUN, from MSDmotif at EBI
  • Genome occurence of 1BUN's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1buna_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1bunb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bun] [1bun_A] [1bun_B]
  • SWISS-PROT database: [P00989] [P00617]
  • Domain organization of [IVBI2_BUNMU] [PA21B_BUNMU] by SWISSPFAM
  • Domains found in 1BUN: [KU] [PA2c ] by SMART
  • Other resources with information on 1BUN
  • Community annotation for 1BUN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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