1C0Y Dna date Jul 19, 1999
title Solution Structure Of The [Af]-C8-Dg Adduct Positioned Oppos A Template-Primer Junction
authors Z.Gu, A.Gorin, B.E.Hingerty, S.Broyde, D.J.Patel
compound source
Molecule: Dna (5'-D(Apapcpgpcptpapcpcpaptpcpc)
Chain: A
Engineered: Yes
Other_details: N Atom Of Af-Group Linked To C8 Atom Of G 4
 Synthetic: Yes

Molecule: Dna (5'-D(Gpgpaptpgpgptpapgpc)-3')
Chain: B
Engineered: Yes
Synthetic: Yes
methodSolution NMR
ligand AF enzyme
Primary referenceSolution structures of aminofluorene [AF]-stacked conformers of the syn [AF]-C8-dG adduct positioned opposite dC or dA at a template-primer junction., Gu Z, Gorin A, Hingerty BE, Broyde S, Patel DJ, Biochemistry 1999 Aug 17;38(33):10855-70. PMID:10451382
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (1c0y.pdb1.gz) 13 Kb
  • LPC: Ligand-Protein Contacts for 1C0Y
  • CSU: Contacts of Structural Units for 1C0Y
  • Retrieve 1C0Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1C0Y from S2C, [Save to disk]
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    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1C0Y, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1c0y] [1c0y_B] [1c0y_A]
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    • Other resources with information on 1C0Y
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