1C7H Isomerase date Feb 19, 2000
title Crystal Structure Of A Mutant R75a In Ketosteroid Isomerase Psedomonas Putida Biotype B
authors G.H.Nam, D.H.Kim, D.S.Jang, G.Choi, N.C.Ha, B.H.Oh, K.Y.Choi
compound source
Molecule: Delta-5-3-Ketosteroid Isomerase
Chain: A
Synonym: Ksi, Steroid Delta-Isomerase
Ec: 5.3.3.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Pseudomonas Putida
Organism_taxid: 303
Strain: Biotype B
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_cell_line: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pkk
symmetry Space Group: C 2 2 21
R_factor 0.172 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
36.374 96.062 74.437 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand
enzyme Isomerase E.C.5.3.3.1 BRENDA
related structures by homologous chain: 1E3R, 1W02
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRoles of active site aromatic residues in catalysis by ketosteroid isomerase from Pseudomonas putida biotype B., Kim DH, Nam GH, Jang DS, Choi G, Joo S, Kim JS, Oh BH, Choi KY, Biochemistry 1999 Oct 19;38(42):13810-9. PMID:10529226
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (1c7h.pdb1.gz) 39 Kb
  • CSU: Contacts of Structural Units for 1C7H
  • Likely Quarternary Molecular Structure file(s) for 1C7H
  • Structure Factors (35 Kb)
  • Retrieve 1C7H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1C7H from S2C, [Save to disk]
  • Re-refined 1c7h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1C7H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1C7H
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1C7H, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1c7ha_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1c7h_A] [1c7h]
  • SWISS-PROT database: [P07445]
  • Domain organization of [SDIS_PSEPU] by SWISSPFAM
  • Other resources with information on 1C7H
  • Community annotation for 1C7H at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science