1CEY Signal Transduction date Nov 23, 1994
title Assignments, Secondary Structure, Global Fold, And Dynamics Chemotaxis Y Protein Using Three-And Four-Dimensional Heter (13c,15n) Nmr Spectroscopy
authors F.J.Moy, D.F.Lowry, P.Matsumura, F.W.Dahlquist, J.E.Krywko, P.J.D
compound source
Molecule: Chey
Chain: A
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system_plasmid: Chey
methodSolution NMR
related structures by homologous chain: 1CYE, 2CHY
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAssignments, secondary structure, global fold, and dynamics of chemotaxis Y protein using three- and four-dimensional heteronuclear (13C,15N) NMR spectroscopy., Moy FJ, Lowry DF, Matsumura P, Dahlquist FW, Krywko JE, Domaille PJ, Biochemistry 1994 Sep 6;33(35):10731-42. PMID:8075074
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1517 Kb) [Save to disk]
  • Biological Unit Coordinates (1cey.pdb1.gz) 33 Kb
  • CSU: Contacts of Structural Units for 1CEY
  • Original NMR restraints for 1CEY from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1CEY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CEY from S2C, [Save to disk]
    • View 1CEY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1CEY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CEY, from MSDmotif at EBI
  • Genome occurence of 1CEY's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cey__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cey] [1cey_A]
  • SWISS-PROT database: [P0AE67]
  • Domain organization of [CHEY_ECOLI] by SWISSPFAM
  • Domain found in 1CEY: [REC ] by SMART
    • Other resources with information on 1CEY
  • Community annotation for 1CEY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1CEY from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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