1CKW Metal Transport date Apr 26, 1999
title Cystic Fibrosis Transmembrane Conductance Regulator: Solutio Structures Of Peptides Based On The Phe508 Region, The Most Site Of Disease-Causing Delta-F508 Mutation
authors M.A.Massiah, Y.H.Ko, P.L.Pedersen, A.S.Mildvan
compound source
Molecule: Protein (Cystic Fibrosis Transmembrane Conductanc Regulator (Cftr));
Chain: A
Fragment: F508 Mutation Region
Synonym: P25
Engineered: Yes
Other_details: P25 Peptide In Trifluroethanol
 Synthetic: Yes
Other_details: The Peptide Was Chemically Synthesized. The Is Based On The Phe508 Region Of Cf Transmembrane Regulator Nucleotide Binding Domain 1.
methodSolution NMR
Primary referenceCystic fibrosis transmembrane conductance regulator: solution structures of peptides based on the Phe508 region, the most common site of disease-causing DeltaF508 mutation., Massiah MA, Ko YH, Pedersen PL, Mildvan AS, Biochemistry 1999 Jun 8;38(23):7453-61. PMID:10360942
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (1ckw.pdb1.gz) 7 Kb
  • CSU: Contacts of Structural Units for 1CKW
  • Original NMR restraints for 1CKW from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1CKW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CKW from S2C, [Save to disk]
    • View 1CKW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1CKW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CKW, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ckwa_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ckw_A] [1ckw]
  • SWISS-PROT database: [Q00555]
  • Domain organization of [CFTR_SHEEP] by SWISSPFAM
    • Other resources with information on 1CKW
  • Community annotation for 1CKW at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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