1CSP Transcription Regulation date May 12, 1993
title Crystal Structure Of The Bacillus Subtilis Major Cold Shock Cspb: A Universal Nucleic-Acid Binding Domain
authors H.Schindelin, U.Heinemann
compound source
Molecule: Cold Shock Protein B(Cspb)
Chain: A
Engineered: Yes
Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 32 2 1
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.940 58.940 46.450 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.45 Å
related structures by homologous chain: 1CSQ, 1MJC
Gene
Ontology
ChainFunctionProcessComponent
A
  • transcription antiterminatio...


  • Primary referenceUniversal nucleic acid-binding domain revealed by crystal structure of the B. subtilis major cold-shock protein., Schindelin H, Marahiel MA, Heinemann U, Nature 1993 Jul 8;364(6433):164-8. PMID:8321288
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (14 Kb) [Save to disk]
  • Biological Unit Coordinates (1csp.pdb1.gz) 11 Kb
  • CSU: Contacts of Structural Units for 1CSP
  • Likely Quarternary Molecular Structure file(s) for 1CSP
  • Structure Factors (25 Kb)
  • Retrieve 1CSP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CSP from S2C, [Save to disk]
  • Re-refined 1csp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1CSP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CSP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CSP, from MSDmotif at EBI
  • Genome occurence of 1CSP's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1csp__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1csp] [1csp_A]
  • SWISS-PROT database: [P32081]
  • Domain organization of [CSPB_BACSU] by SWISSPFAM
  • Domain found in 1CSP: [CSP ] by SMART
  • Other resources with information on 1CSP
  • Community annotation for 1CSP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1CSP from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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