1D1W Oxidoreductase date Sep 21, 1999
title Bovine Endothelial Nitric Oxide Synthase Heme Domain Complex Aminothiazoline (H4b Bound)
authors H.Li, C.S.Raman, P.Martasek, V.Kral, B.S.S.Masters, T.L.Poulos
compound source
Molecule: Nitric Oxide Synthase
Chain: A, B
Fragment: Heme Domain
Synonym: Nos, Enos
Ec: 1.14.13.39
Engineered: Yes
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Cell: Endothelial Cells
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.204 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.460 106.320 156.330 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand ACT, ATQ, CAD, GOL, H4B, HEM, ZN BindingDB enzyme Oxidoreductase E.C.1.14.13.39 BRENDA
related structures by homologous chain: 1I83, 1VAG
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMapping the active site polarity in structures of endothelial nitric oxide synthase heme domain complexed with isothioureas., Li H, Raman CS, Martasek P, Kral V, Masters BS, Poulos TL, J Inorg Biochem 2000 Aug 31;81(3):133-9. PMID:11051558
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (151 Kb) [Save to disk]
  • Biological Unit Coordinates (1d1w.pdb1.gz) 144 Kb
  • LPC: Ligand-Protein Contacts for 1D1W
  • CSU: Contacts of Structural Units for 1D1W
  • Likely Quarternary Molecular Structure file(s) for 1D1W
  • Structure Factors (577 Kb)
  • Retrieve 1D1W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1D1W from S2C, [Save to disk]
  • Re-refined 1d1w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1D1W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1D1W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1D1W, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1d1wa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1d1wb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1d1w] [1d1w_A] [1d1w_B]
  • SWISS-PROT database: [P29473]
  • Domain organization of [NOS3_BOVIN] by SWISSPFAM
  • Other resources with information on 1D1W
  • Community annotation for 1D1W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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