1D7P	Blood Clotting	date	Oct 19, 1999
title	Crystal Structure Of The C2 Domain Of Human Factor Viii At 1 Resolution At 1.5 A
authors	K.P.Pratt, B.W.Shen, B.L.Stoddard
compound		source
Molecule: Coagulation Factor Viii Precursor Chain: M Fragment: C2-Domain Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Tissue: Blood Expression_system: Saccharomyces Cerevisiae Expression_system_common: Baker'S Yeast Expression_system_taxid: 4932
symmetry	Space Group: P 21 21 21	R_factor 0.205 R_Free 0.215
crystal cell	length a length b length c angle alpha angle beta angle gamma 46.440 56.410 65.740 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	CYS, GOL, SO4	enzyme
related structures	by homologous chain: 1IQD
Primary reference	Structure of the C2 domain of human factor VIII at 1.5 A resolution., Pratt KP, Shen BW, Takeshima K, Davie EW, Fujikawa K, Stoddard BL, Nature 1999 Nov 25;402(6760):439-42. PMID:10586887

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk] Biological Unit Coordinates (1d7p.pdb1.gz) 31 Kb LPC: Ligand-Protein Contacts for 1D7P CSU: Contacts of Structural Units for 1D7P Likely Quarternary Molecular Structure file(s) for 1D7P Retrieve 1D7P in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1D7P from S2C, [Save to disk]

View 1D7P in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1D7P

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Structure-derived information

Conformational Epitope Prediction for 1D7P from the CEP Server. Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1D7P, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1d7pm_, region M [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1d7p_M] [1d7p] SWISS-PROT database: [P00451] Domain organization of [FA8_HUMAN] by SWISSPFAM Domain found in 1D7P: [FA58C ] by SMART

Other resources with information on 1D7P

Community annotation for 1D7P at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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