1DG2 Toxin date Nov 23, 1999
title Solution Conformation Of A-Conotoxin Auib
authors J.H.Cho, K.H.Mok, B.M.Olivera, J.M.Mcintosh, K.H.Park, K.H.Han
compound source
Molecule: A-Conotoxin Auib
Chain: A
Other_details: Synthetic
 Organism_scientific: Conus Aulicus
Organism_taxid: 89437
Secretion: Venom Of Conus Aulicus
Other_details: Chemically Synthesized
methodSolution NMR
ligand NH2 enzyme
Primary referenceNuclear magnetic resonance solution conformation of alpha-conotoxin AuIB, an alpha(3)beta(4) subtype-selective neuronal nicotinic acetylcholine receptor antagonist., Cho JH, Mok KH, Olivera BM, McIntosh JM, Park KH, Han KH, J Biol Chem 2000 Mar 24;275(12):8680-5. PMID:10722709
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (1dg2.pdb1.gz) 4 Kb
  • LPC: Ligand-Protein Contacts for 1DG2
  • CSU: Contacts of Structural Units for 1DG2
  • Original NMR restraints for 1DG2 from PDB
  • Retrieve 1DG2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DG2 from S2C, [Save to disk]
    • View 1DG2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1DG2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1DG2, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1dg2a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1k1dg2, region G:53-384 [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dg2] [1dg2_A]
  • SWISS-PROT database: [P56640]
  • Domain organization of [CA1B_CONAL] by SWISSPFAM
    • Other resources with information on 1DG2
  • Community annotation for 1DG2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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