1DHG	Electron Transport	date	Mar 22, 1999
title	Hg-Substituted Desulforedoxin
authors	M.Archer, A.L.Carvalho, S.Teixeira, I.Moura, J.J.G.Moura, F.Rusna M.J.Romao
compound		source
Molecule: Protein (Desulforedoxin) Chain: A, B Engineered: Yes Other_details: Mercury Substituted		Organism_scientific: Desulfovibrio Gigas Organism_taxid: 879 Cellular_location: Cytoplasm Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_cellular_location: Cytoplasm Expression_system_gene: Dsr
symmetry	Space Group: P 31 2 1	R_factor 0.182 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 27.900 27.900 130.900 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	HG	enzyme
related structures	by homologous chain: 1DCD
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural studies by X-ray diffraction on metal substituted desulforedoxin, a rubredoxin-type protein., Archer M, Carvalho AL, Teixeira S, Moura I, Moura JJ, Rusnak F, Romao MJ, Protein Sci 1999 Jul;8(7):1536-45. PMID:10422844

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk] Biological Unit Coordinates (1dhg.pdb1.gz) 11 Kb LPC: Ligand-Protein Contacts for 1DHG CSU: Contacts of Structural Units for 1DHG Likely Quarternary Molecular Structure file(s) for 1DHG Retrieve 1DHG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1DHG from S2C, [Save to disk]

View 1DHG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1DHG

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1DHG, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1dhga_, region A [Jmol] [rasmolscript] [script source]     - Domain d1dhgb_, region B [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1dhg] [1dhg_B] [1dhg_A] SWISS-PROT database: [P00273] Domain organization of [DESR_DESGI] by SWISSPFAM

Other resources with information on 1DHG

Community annotation for 1DHG at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---