1E1Q	Atp Phosphorylase	date	May 10, 2000
title	Bovine Mitochondrial F1-Atpase At 100k
authors	K.Braig, R.I.Menz, M.G.Montgomery, A.G.W.Leslie, J.E.Walker
compound		source
Molecule: Bovine Mitochondrial F1-Atpase Chain: A, B, C Synonym: Atp Synthase Alpha Chain Heart Isoform Ec: 3.6.1.34		Organism_scientific: Bos Taurus Organism_common: Bovine Organism_taxid: 9913 Organ: Heart Tissue: Muscle Organelle: Mitochondrion
Molecule: Bovine Mitochondrial F1-Atpase Chain: D, E, F Synonym: Atp Synthase Beta Chain Ec: 3.6.1.34		Organism_scientific: Bos Taurus Organism_common: Bovine Organism_taxid: 9913 Organ: Heart Tissue: Muscle Organelle: Mitochondrion
Molecule: Bovine Mitochondrial F1-Atpase Chain: G Synonym: Atp Synthase Gamma Chain Ec: 3.6.1.34		Organism_scientific: Bos Taurus Organism_common: Bovine Organism_taxid: 9913 Organ: Heart Tissue: Muscle Organelle: Mitochondrion
symmetry	Space Group: P 21 21 21	R_factor 0.232 R_Free 0.280
crystal cell	length a length b length c angle alpha angle beta angle gamma 280.800 107.400 139.600 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.61 Å
ligand	ADP, ANP, MG, PO4	enzyme	Hydrolase E.C.3.6.1.34 BRENDA
related structures	by homologous chain: 1E1R, 1MAB
Gene Ontology	Chain Function Process Component A, C, B F, D, E G
Primary reference	Structure of bovine mitochondrial F(1)-ATPase inhibited by Mg(2+) ADP and aluminium fluoride., Braig K, Menz RI, Montgomery MG, Leslie AG, Walker JE, Structure Fold Des 2000 Jun 15;8(6):567-73. PMID:10873854

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (472 Kb) [Save to disk] Biological Unit Coordinates (1e1q.pdb1.gz) 463 Kb LPC: Ligand-Protein Contacts for 1E1Q CSU: Contacts of Structural Units for 1E1Q Likely Quarternary Molecular Structure file(s) for 1E1Q Retrieve 1E1Q in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1E1Q from S2C, [Save to disk]

View 1E1Q in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1E1Q

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1E1Q, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1e1qa2, region A:24-94 [Jmol] [rasmolscript] [script source]     - Domain d1e1qa1, region A:380-510 [Jmol] [rasmolscript] [script source]     - Domain d1e1qa3, region A:95-379 [Jmol] [rasmolscript] [script source]     - Domain d1e1qb2, region B:24-94 [Jmol] [rasmolscript] [script source]     - Domain d1e1qb1, region B:380-510 [Jmol] [rasmolscript] [script source]     - Domain d1e1qb3, region B:95-379 [Jmol] [rasmolscript] [script source]     - Domain d1e1qc2, region C:19-94 [Jmol] [rasmolscript] [script source]     - Domain d1e1qc1, region C:380-510 [Jmol] [rasmolscript] [script source]     - Domain d1e1qc3, region C:95-379 [Jmol] [rasmolscript] [script source]     - Domain d1e1qd1, region D:358-475 [Jmol] [rasmolscript] [script source]     - Domain d1e1qd3, region D:82-357 [Jmol] [rasmolscript] [script source]     - Domain d1e1qd2, region D:9-81 [Jmol] [rasmolscript] [script source]     - Domain d1e1qe1, region E:358-474 [Jmol] [rasmolscript] [script source]     - Domain d1e1qe3, region E:82-357 [Jmol] [rasmolscript] [script source]     - Domain d1e1qe2, region E:9-81 [Jmol] [rasmolscript] [script source]     - Domain d1e1qf1, region F:358-474 [Jmol] [rasmolscript] [script source]     - Domain d1e1qf3, region F:82-357 [Jmol] [rasmolscript] [script source]     - Domain d1e1qf2, region F:9-81 [Jmol] [rasmolscript] [script source]     - Domain d1e1qg_, region G [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1e1q_G] [1e1q_E] [1e1q] [1e1q_F] [1e1q_B] [1e1q_D] [1e1q_C] [1e1q_A] SWISS-PROT database: [P19483] [P00829] [P05631] Domain organization of [ATPA_BOVIN] [ATPB_BOVIN] [ATPG_BOVIN] by SWISSPFAM Domain found in 1E1Q: [AAA ] by SMART

Other resources with information on 1E1Q

Community annotation for 1E1Q at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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