1E5G Complement Inhibitor date Jul 25, 2000
title Solution Structure Of Central Cp Module Pair Of A Pox Virus Complement Inhibitor
authors C.E.Henderson, K.Bromek, N.P.Mullin, B.O.Smith, D.Uhrin, P.N.Barl
compound source
Molecule: Complement Control Protein C3
Chain: A
Fragment: Modules 2 And 3 Residues 84-203
Synonym: Sp35,28 Kda Protein, Secretory Protein 35, Protein
Engineered: Yes
 Organism_scientific: Vaccinia Virus
Organism_taxid: 10249
Strain: Copenhagen
Gene: C21l
Expression_system: Pichia Pastoris
Expression_system_taxid: 4922
Expression_system_strain: Km71
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ppiczalphaa Without Histidine De
methodSolution NMR
related structures by homologous chain: 1VVE
Primary referenceSolution structure and dynamics of the central CCP module pair of a poxvirus complement control protein., Henderson CE, Bromek K, Mullin NP, Smith BO, Uhrin D, Barlow PN, J Mol Biol 2001 Mar 16;307(1):323-39. PMID:11243823
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1404 Kb) [Save to disk]
  • Biological Unit Coordinates (1e5g.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 1E5G
  • Original NMR restraints for 1E5G from PDB
  • Retrieve 1E5G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1E5G from S2C, [Save to disk]
    • View 1E5G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1E5G
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1E5G, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1e5ga2, region A:69-126 [Jmol] [rasmolscript] [script source]
        - Domain d1e5ga1, region A:7-68 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1e5g] [1e5g_A]
  • SWISS-PROT database: [P68638]
  • Domain organization of [VCP_VACCW] by SWISSPFAM
  • Domain found in 1E5G: [CCP ] by SMART
    • Other resources with information on 1E5G
  • Community annotation for 1E5G at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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