1EG6 CRYSTAL STRUCTURE ANALYSIS OF D(CG(5-BRU)ACG) COMPLEXES TO A PHENAZINE date
authors Cardin, C.J., Denny, W.A., Hobbs, J.R., Thorpe, J.H.
compound source
symmetry
R_factor
R_Free 0.3469
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand 3CO, BFA, BR enzyme
Primary referenceGuanine specific binding at a DNA junction formed by d[CG(5-BrU)ACG](2) with a topoisomerase poison in the presence of Co(2+) ions., Thorpe JH, Hobbs JR, Todd AK, Denny WA, Charlton P, Cardin CJ, Biochemistry 2000 Dec 12;39(49):15055-61. PMID:11106483
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (11 Kb) [Save to disk]
  • Biological Unit Coordinates (1eg6.pdb1.gz) 7 Kb
  • LPC: Ligand-Protein Contacts for 1EG6
  • CSU: Contacts of Structural Units for 1EG6
  • Likely Quarternary Molecular Structure file(s) for 1EG6
  • Retrieve 1EG6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EG6 from S2C, [Save to disk]
    • View 1EG6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1EG6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EG6, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1eg6_A] [1eg6] [1eg6_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1EG6
  • Community annotation for 1EG6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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