1EGZ Hydrolase date Mar 18, 1999
title Cellulase Cel5 From Erwinia Chrysanthemi, A Family Gh 5-2 En
authors M.Czjzek, M.El Hassouni, B.Py, F.Barras
compound source
Molecule: Endoglucanase Z
Chain: A, B, C
Fragment: Catalytic Domain
Synonym: Egz, Cel5
Ec: 3.2.1.4
Other_details: Three Copies In The Asymmetric Unit
Organism_scientific: Erwinia Chrysanthemi
Organism_taxid: 556
Secretion: Type II
Cellular_location: Exterior
Other_details: Gene: Celz
symmetry Space Group: C 1 2 1
R_factor 0.179 R_Free 0.263
crystal
cell
length a length b length c angle alpha angle beta angle gamma
168.800 47.200 120.100 90.00 105.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand CA enzyme Hydrolase E.C.3.2.1.4 BRENDA
related structures by homologous chain: 1TVP
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceType II protein secretion in gram-negative pathogenic bacteria: the study of the structure/secretion relationships of the cellulase Cel5 (formerly EGZ) from Erwinia chrysanthemi., Chapon V, Czjzek M, El Hassouni M, Py B, Juy M, Barras F, J Mol Biol 2001 Jul 27;310(5):1055-66. PMID:11501995
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (147 Kb) [Save to disk]
  • Biological Unit Coordinates (1egz.pdb1.gz) 49 Kb
  • Biological Unit Coordinates (1egz.pdb2.gz) 49 Kb
  • Biological Unit Coordinates (1egz.pdb3.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 1EGZ
  • CSU: Contacts of Structural Units for 1EGZ
  • Likely Quarternary Molecular Structure file(s) for 1EGZ
  • Structure Factors (315 Kb)
  • Retrieve 1EGZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EGZ from S2C, [Save to disk]
  • Re-refined 1egz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1EGZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1EGZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EGZ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1egza_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1egzb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1egzc_, region C [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1egz_B] [1egz_C] [1egz_A] [1egz]
  • SWISS-PROT database: [P07103]
  • Domain organization of [GUNZ_DICD3] by SWISSPFAM
  • Other resources with information on 1EGZ
  • Community annotation for 1EGZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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