1EQ1 Lipid Binding Protein date Mar 31, 2000
title Nmr Structure Of An Exchangeable Apolipoprotein-Manduca Sext Apolipophorin-III
authors J.Wang, B.D.Sykes, R.O.Ryan
compound source
Molecule: Apolipophorin-III
Chain: A
Synonym: Apolp-III
Engineered: Yes
Other_details: Intact Exchangeable Apolipoprotein
 Organism_scientific: Manduca Sexta
Organism_common: Tobacco Hornworm
Organism_taxid: 7130
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet22b
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for the conformational adaptability of apolipophorin III, a helix-bundle exchangeable apolipoprotein., Wang J, Sykes BD, Ryan RO, Proc Natl Acad Sci U S A 2002 Feb 5;99(3):1188-93. PMID:11818551
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1074 Kb) [Save to disk]
  • Biological Unit Coordinates (1eq1.pdb1.gz) 42 Kb
  • CSU: Contacts of Structural Units for 1EQ1
  • Retrieve 1EQ1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EQ1 from S2C, [Save to disk]
    • View 1EQ1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1EQ1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EQ1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1eq1a_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1eq1_A] [1eq1]
  • SWISS-PROT database: [P13276]
  • Domain organization of [APL3_MANSE] by SWISSPFAM
    • Other resources with information on 1EQ1
  • Community annotation for 1EQ1 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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