1EYF	Dna Binding Protein	date	May 06, 2000
title	Refined Structure Of The Dna Methyl Phosphotriester Repair D E. Coli Ada
authors	Y.Lin, V.Dotsch, T.Wintner, K.Peariso, L.C.Myers, J.E.Penner-Hahn G.L.Verdine, G.Wagner
compound		source
Molecule: Ada Regulatory Protein Chain: A Fragment: N-Terminal 10 Kda Domain Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pada39
method	Solution NMR
ligand	ZN	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structural basis for the functional switch of the E. coli Ada protein., Lin Y, Dotsch V, Wintner T, Peariso K, Myers LC, Penner-Hahn JE, Verdine GL, Wagner G, Biochemistry 2001 Apr 10;40(14):4261-71. PMID:11284682

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (609 Kb) [Save to disk] Biological Unit Coordinates (1eyf.pdb1.gz) 24 Kb LPC: Ligand-Protein Contacts for 1EYF CSU: Contacts of Structural Units for 1EYF Experimental data, such as chemical shifts, at BioMagResBank (BMRB) NMR Restraints Grid from BioMagResBank (BMRB) Retrieve 1EYF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1EYF from S2C, [Save to disk]

View 1EYF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1EYF

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1EYF, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1eyfa_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1eyf_A] [1eyf] SWISS-PROT database: [P06134] Domain organization of [ADA_ECOLI] by SWISSPFAM

Other resources with information on 1EYF

Community annotation for 1EYF at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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