1FAG Electron Transport date Aug 01, 1996
title Structure Of Cytochrome P450
authors H.Y.Li, T.L.Poulos
compound source
Molecule: Cytochrome P450 Bm-3
Chain: A, B, C, D
Fragment: Heme Domain
Synonym: P450 102, Fatty Acid Hydroxylase
Ec: 1.14.14.1
Engineered: Yes
 Organism_scientific: Bacillus Megaterium
Organism_taxid: 1404
Strain: 14581
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.246 R_Free 0.353
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.200 165.200 223.900 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand HEM, PAM enzyme Oxidoreductase E.C.1.14.14.1 BRENDA
related structures by homologous chain: 1FAH, 1SMJ
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceThe structure of the cytochrome p450BM-3 haem domain complexed with the fatty acid substrate, palmitoleic acid., Li H, Poulos TL, Nat Struct Biol 1997 Feb;4(2):140-6. PMID:9033595
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (306 Kb) [Save to disk]
  • Biological Unit Coordinates (1fag.pdb1.gz) 79 Kb
  • Biological Unit Coordinates (1fag.pdb2.gz) 78 Kb
  • Biological Unit Coordinates (1fag.pdb3.gz) 78 Kb
  • Biological Unit Coordinates (1fag.pdb4.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 1FAG
  • CSU: Contacts of Structural Units for 1FAG
  • Likely Quarternary Molecular Structure file(s) for 1FAG
  • Structure Factors (464 Kb)
  • Retrieve 1FAG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FAG from S2C, [Save to disk]
  • Re-refined 1fag structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1FAG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1FAG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FAG, from MSDmotif at EBI
  • Genome occurence of 1FAG's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1faga_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1fagb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1fagc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1fagd_, region D [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fag_B] [1fag] [1fag_C] [1fag_A] [1fag_D]
  • SWISS-PROT database: [P14779]
  • Domain organization of [CPXB_BACME] by SWISSPFAM
    • Other resources with information on 1FAG
  • Community annotation for 1FAG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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