1FJ8 Transferase date Aug 07, 2000
title The Structure Of Beta-Ketoacyl-[Acyl Carrier Protein] Synthase I In Complex With Cerulenin, Implications For Drug Design
authors A.C.Price, K.Choi, R.J.Heath, Z.Li, S.W.White, C.O.Rock
compound source
Molecule: Beta-Ketoacyl-[Acyl Carrier Protein] Synthase I
Chain: A, B, C, D
Ec: 2.3.1.41
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet15b
symmetry Space Group: P 21 21 21
R_factor 0.230 R_Free 0.265
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.227 139.585 212.228 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.27 Å
ligand CER enzyme Transferase E.C.2.3.1.41 BRENDA
related structures by homologous chain: 1DD8, 1H4F
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceInhibition of beta-ketoacyl-acyl carrier protein synthases by thiolactomycin and cerulenin. Structure and mechanism., Price AC, Choi KH, Heath RJ, Li Z, White SW, Rock CO, J Biol Chem 2001 Mar 2;276(9):6551-9. PMID:11050088
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (246 Kb) [Save to disk]
  • Biological Unit Coordinates (1fj8.pdb1.gz) 123 Kb
  • Biological Unit Coordinates (1fj8.pdb2.gz) 123 Kb
  • LPC: Ligand-Protein Contacts for 1FJ8
  • CSU: Contacts of Structural Units for 1FJ8
  • Likely Quarternary Molecular Structure file(s) for 1FJ8
  • Structure Factors (752 Kb)
  • Retrieve 1FJ8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FJ8 from S2C, [Save to disk]
  • Re-refined 1fj8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1FJ8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1FJ8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FJ8, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fj8a1, region A:2-253 [Jmol] [rasmolscript] [script source]
        - Domain d1fj8a2, region A:254-404 [Jmol] [rasmolscript] [script source]
        - Domain d1fj8b1, region B:2-253 [Jmol] [rasmolscript] [script source]
        - Domain d1fj8b2, region B:254-404 [Jmol] [rasmolscript] [script source]
        - Domain d1fj8c1, region C:2-253 [Jmol] [rasmolscript] [script source]
        - Domain d1fj8c2, region C:254-404 [Jmol] [rasmolscript] [script source]
        - Domain d1fj8d1, region D:2-253 [Jmol] [rasmolscript] [script source]
        - Domain d1fj8d2, region D:254-404 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fj8] [1fj8_C] [1fj8_A] [1fj8_B] [1fj8_D]
  • SWISS-PROT database: [P0A953]
  • Domain organization of [FABB_ECOLI] by SWISSPFAM
    • Other resources with information on 1FJ8
  • Community annotation for 1FJ8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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