1FMF Isomerase date Aug 17, 2000
title Refined Solution Structure Of The (13c,15n-Labeled) B12-Bind Subunit Of Glutamate Mutase From Clostridium Tetanomorphum
authors B.Hoffmann, R.Konrat, M.Tollinger, M.Huhta, E.N.G.Marsh, B.Kraeut
compound source
Molecule: Methylaspartate Mutase S Chain
Chain: A
Synonym: Glutamate Mutase, Muts
Ec: 5.4.99.1
Engineered: Yes
 Organism_scientific: Clostridium Tetanomorphum
Organism_taxid: 1553
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmutsx
methodSolution NMR
ligand
enzyme Isomerase E.C.5.4.99.1 BRENDA
related structures by homologous chain: 1CB7, 1ID8
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA protein pre-organized to trap the nucleotide moiety of coenzyme B(12): refined solution structure of the B(12)-binding subunit of glutamate mutase from Clostridium tetanomorphum., Hoffmann B, Tollinger M, Konrat R, Huhta M, Marsh EN, Krautler B, Chembiochem. 2001 Sep 3;2(9):643-55. PMID:11828501
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1030 Kb) [Save to disk]
  • Biological Unit Coordinates (1fmf.pdb1.gz) 36 Kb
  • CSU: Contacts of Structural Units for 1FMF
  • Retrieve 1FMF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FMF from S2C, [Save to disk]
    • View 1FMF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1FMF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FMF, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fmfa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fmf_A] [1fmf]
  • SWISS-PROT database: [Q05488]
  • Domain organization of [MAMA_CLOTT] by SWISSPFAM
    • Other resources with information on 1FMF
  • Community annotation for 1FMF at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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