1FQZ Rna date Sep 07, 2000
title Nmr Validated Model Of Domain Iiid Of Hepatitis C Virus Inte Ribosome Entry Site
authors R.Klinck, E.Westhof, S.Walker, M.Afshar, A.Collier, F.Aboul-Ela
compound source
Molecule: Hepatitis C Virus Ires Domain Iiid
Chain: A
Engineered: Yes
 Synthetic: Yes
Other_details: Transcribed Using T7 Rna Polymerase
methodSolution NMR
Primary referenceA potential RNA drug target in the hepatitis C virus internal ribosomal entry site., Klinck R, Westhof E, Walker S, Afshar M, Collier A, Aboul-Ela F, RNA 2000 Oct;6(10):1423-31. PMID:11073218
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (18 Kb) [Save to disk]
  • Biological Unit Coordinates (1fqz.pdb1.gz) 15 Kb
  • CSU: Contacts of Structural Units for 1FQZ
  • Retrieve 1FQZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FQZ from S2C, [Save to disk]
    • View 1FQZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1FQZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FQZ, from MSDmotif at EBI
  • Structure summary from SCOR (Structural Classification of RNA)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fqz] [1fqz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1FQZ
  • Community annotation for 1FQZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science