1FRH Electron Transport date Sep 27, 1993
title Azotobacter Vinelandii Ferredoxin I: Alteration Of Individua Charges And The [4fe-4s] Cluster Reduction Potential
authors C.D.Stout
compound source
Molecule: Ferredoxin
Chain: A
Engineered: Yes
 Organism_scientific: Azotobacter Vinelandii
Organism_taxid: 354
Gene: Potential
Expression_system_plasmid: Pkt230
symmetry Space Group: P 41 21 2
R_factor 0.224 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.250 55.250 95.270 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand F3S, SF4 enzyme
related structures by homologous chain: 1FRL, 1FRM
Gene
Ontology
ChainFunctionProcessComponent
A
  • electron transfer activity


    • Primary referenceAzotobacter vinelandii ferredoxin I. Alteration of individual surface charges and the [4FE-4S]2+/+ cluster reduction potential., Shen B, Jollie DR, Stout CD, Diller TC, Armstrong FA, Gorst CM, La Mar GN, Stephens PJ, Burgess BK, J Biol Chem 1994 Mar 18;269(11):8564-75. PMID:8132582
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (22 Kb) [Save to disk]
  • Biological Unit Coordinates (1frh.pdb1.gz) 18 Kb
  • LPC: Ligand-Protein Contacts for 1FRH
  • CSU: Contacts of Structural Units for 1FRH
  • Likely Quarternary Molecular Structure file(s) for 1FRH
  • Retrieve 1FRH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FRH from S2C, [Save to disk]
    • View 1FRH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1FRH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FRH, from MSDmotif at EBI
  • Genome occurence of 1FRH's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1frh__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1frh] [1frh_A]
  • SWISS-PROT database: [P00214]
  • Domain organization of [FER1_AZOVI] by SWISSPFAM
    • Other resources with information on 1FRH
  • Community annotation for 1FRH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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