1FS4 Transferase date Sep 08, 2000
title Structures Of Glycogen Phosphorylase-Inhibitor Complexes And Implications For Structure-Based Drug Design
authors K.A.Watson, K.E.Tsitsanou, M.Gregoriou, S.E.Zographos, V.T.Skamn N.G.Oikonomakos, G.W.Fleet, L.N.Johnson
compound source
Molecule: Glycogen Phosphorylase
Chain: A
Ec: 2.4.1.1
Organism_scientific: Oryctolagus Cuniculus
Organism_common: Rabbit
Organism_taxid: 9986
Tissue: Muscle
symmetry Space Group: P 43 21 2
R_factor 0.177 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
128.500 128.500 116.300 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.38 Å
ligand CRA, PLP BindingDB enzyme Transferase E.C.2.4.1.1 BRENDA
related structures by homologous chain: 1FTY, 1FU4
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceKinetic and crystallographic studies of glucopyranose spirohydantoin and glucopyranosylamine analogs inhibitors of glycogen phosphorylase., Watson KA, Chrysina ED, Tsitsanou KE, Zographos SE, Archontis G, Fleet GW, Oikonomakos NG, Proteins. 2005 Dec 1;61(4):966-83. PMID:16222658
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (144 Kb) [Save to disk]
  • Biological Unit Coordinates (1fs4.pdb1.gz) 276 Kb
  • LPC: Ligand-Protein Contacts for 1FS4
  • CSU: Contacts of Structural Units for 1FS4
  • Likely Quarternary Molecular Structure file(s) for 1FS4
  • Retrieve 1FS4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FS4 from S2C, [Save to disk]
  • View 1FS4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FS4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FS4, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fs4a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fs4_A] [1fs4]
  • SWISS-PROT database: [P00489]
  • Domain organization of [PYGM_RABIT] by SWISSPFAM
  • Other resources with information on 1FS4
  • Community annotation for 1FS4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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