1FT9 Transcription date Sep 12, 2000
title Structure Of The Reduced (Feii) Co-Sensing Protein From R. R
authors W.N.Lanzilotta, D.J.Schuller, T.L.Poulos, M.V.Thorsteinsson, B.K G.P.Roberts
compound source
Molecule: Carbon Monoxide Oxidation System Transcription Re
Chain: A, B
Synonym: Cooa Gene Product
Engineered: Yes
 Organism_scientific: Rhodospirillum Rubrum
Organism_taxid: 1085
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 21 2
R_factor 0.230 R_Free 0.280
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.253 92.253 143.723 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand HEM enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of the CO sensing transcription activator CooA., Lanzilotta WN, Schuller DJ, Thorsteinsson MV, Kerby RL, Roberts GP, Poulos TL, Nat Struct Biol 2000 Oct;7(10):876-80. PMID:11017196
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (1ft9.pdb1.gz) 71 Kb
  • LPC: Ligand-Protein Contacts for 1FT9
  • CSU: Contacts of Structural Units for 1FT9
  • Likely Quarternary Molecular Structure file(s) for 1FT9
  • Structure Factors (174 Kb)
  • Retrieve 1FT9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FT9 from S2C, [Save to disk]
  • Re-refined 1ft9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1FT9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1FT9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FT9, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ft9a1, region A:134-213 [Jmol] [rasmolscript] [script source]
        - Domain d1ft9a2, region A:2-133 [Jmol] [rasmolscript] [script source]
        - Domain d1ft9b1, region B:134-213 [Jmol] [rasmolscript] [script source]
        - Domain d1ft9b2, region B:2-133 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ft9_A] [1ft9] [1ft9_B]
  • SWISS-PROT database: [P72322]
  • Domain organization of [P72322_RHORU] by SWISSPFAM
  • Domains found in 1FT9: [HTH_CRP] [cNMP ] by SMART
    • Other resources with information on 1FT9
  • Community annotation for 1FT9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science